Hotels in Mission Bay

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Top-rated hotels in Mission Bay

Guests agree: these hotels are highly rated for location, cleanliness and more.

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Superhost
Hotel room in San Diego
New place to stay

Private Sauna, Free Beach Gear, 2 Min to Beach

Why stay somewhere ORDINARY, when you could stay at The Boardwalk Hotel—Mission Beach’s brand new and ONLY boutique residence hotel, where luxury meets adventure right on the sand! Every stay includes free bikes, boards, wetsuits, rollerblades, and more. Plus exclusive savings at Mission Beach’s best restaurants and attractions, including 20% off Belmont Park admission. Don’t just take our word—feel free to look up “The Boardwalk Hotel Mission Beach” to see why guests rave about us!

Hotel room in San Diego
4.75 out of 5 average rating, 4 reviews

Join a yoga class or hit the onsite putting course

The Lanai Garden Premium room with two queen beds offers 460 square feet of upgraded comfort, featuring a patio with serene garden or lagoon views. Thoughtful amenities include high-speed internet, a mini-refrigerator, coffee maker, and a modern bathroom with a bathtub/shower combination. Select rooms may include a walk-in closet, wet bar, or preferred location for added luxury. Nestled among lush resort landscaping, this non-smoking room is perfect for a relaxing San Diego escape.

Superhost
A modern lobby area is presented with a combination of seating options, including inviting dark chairs and a spacious sofa. Soft lighting is enhances the space, with a large TV mounted on the wall and decorative plants positioned to add greenery.
Hotel room in San Diego
4.71 out of 5 average rating, 7 reviews

Stylish San Diego Downtown Marriott Suite

In the center of the action, Marriott Vacation Club, San Diego is a true escape that will greet you with a perfect blend of historic ambiance and contemporary design. Inspired by San Diego's renowned Gaslamp Quarter, many of the 264 well-appointed suites feature stunning San Diego views and atmospheric wood and metal finishes. Enjoy this sleek, sophisticated setting to unwind from a day of exploration and recharge before venturing out to experience San Diego's amazing nightlife

This spacious hotel guestroom features two queen beds adorned with crisp linens. A bedside table with a decorative lamp complements the neutral tones, while a vibrant wall art piece adds a colorful touch. Natural light streams through a large window with sheer curtains.
Hotel room in San Diego
5 out of 5 average rating, 3 reviews

Convenient Accommodation Near San Diego Airport!

Our beachfront property is not only conveniently situated near the airport, but it also offers breathtaking views of the ocean. Whether you're interested in exploring the vibrant Port of San Diego or embarking on a cruise from the B Street Cruise Ship Terminal, this is the perfect place to start your seaside adventure. Additionally, you'll find world-class attractions such as the San Diego Zoo and USS Midway Museum just a short drive away.

Superhost
A shared dorm room features individual sleeping pods, each with a memory foam mattress and privacy curtains. Wood-paneled cubbies are equipped with personal light and power outlets. The floor is covered with sleek, dark wood planks, enhancing the modern aesthetic of the space.
Shared hotel room in San Diego
4.76 out of 5 average rating, 89 reviews

Stay Classy Hostel - Downtown - Solo Pod

Stay Classy Hostel is in downtown San Diego, just minutes from the Gaslamp Quarter, Petco Park, and the Convention Center—only 2 blocks from the Park & Market Trolley Station. We offer clean, modern, and affordable shared rooms with hotel-style comfort. Enjoy memory foam beds with privacy curtains, fast Wi-Fi, secure PIN entry, and stylish common areas. Perfect for travelers looking to relax, connect, and explore. Stay Classy.

Hotel room in San Diego
4.89 out of 5 average rating, 114 reviews

2BR Top Floor Suite • Free Parking - Conv Center

FREE Parking + Walk to the Convention Center Stay in the heart of Downtown San Diego — just minutes from the San Diego Convention Center, Gaslamp Quarter dining, Petco Park, and the waterfront. The rare bonus? Free overnight parking is included for one vehicle. Whether you're visiting for a conference, business trip, or weekend getaway, this professionally managed boutique suite offers location, comfort, and simplicity.

Guest favourite
An open layout showcases a cozy seating area with a large gray sectional couch and a decorative lamp. In the background, a spacious queen-sized bed is dressed in fresh linens, complemented by artwork on the wall. Large windows allow natural light to fill the room.
Hotel room in San Diego
4.83 out of 5 average rating, 133 reviews

Top Floor • Walk to Conv Center • Free Parking

FREE Parking + Walk to the Convention Center Stay in the heart of Downtown San Diego — just minutes from the San Diego Convention Center, Gaslamp Quarter dining, Petco Park, and the waterfront. The rare bonus? Free overnight parking is included for one vehicle. Whether you're visiting for a conference, business trip, or weekend getaway, this professionally managed boutique suite offers location, comfort, and simplicity.

Hotel room in San Diego
4.83 out of 5 average rating, 66 reviews

Close to Airport | Dining. Balcony & Pet-Friendly

Stay at Courtyard by Marriott San Diego Downtown Little Italy, just 2 miles from the airport and steps from the Trolley, top restaurants, and local markets. Set in one of the city’s most walkable neighborhoods, you're minutes from the Gaslamp Quarter, waterfront, and major attractions. Enjoy rooms with balconies and skyline views, free Wi-Fi, EV parking, and more. The pool, fitness center, and restaurant reopening soon.

The living area features a dining table paired with four turquoise stools. A console unit is positioned adjacent to the table, displaying decorative items. A wall-mounted television is visible above the console, and a round mirror adds a touch of elegance to the gray accent wall.
Hotel room in San Diego
4.76 out of 5 average rating, 127 reviews

Convention close by • 2BR Suite • Free Parking

FREE Parking + Walk to the Convention Center Stay in the heart of Downtown San Diego — just minutes from the San Diego Convention Center, Gaslamp Quarter dining, Petco Park, and the waterfront. The rare bonus? Free overnight parking is included. Whether you're visiting for a conference, business trip, or weekend getaway, this professionally managed boutique suite offers location, comfort, and simplicity.

Superhost
Hotel room in San Diego
5 out of 5 average rating, 9 reviews

Near Little Italy + Rooftop Drinks. Skyline Views

Stay where the city comes alive—Hotel Republic San Diego puts you steps from Little Italy, 1 mile from the Gaslamp Quarter, and 2 miles from the bay. Grab free bikes, join rooftop yoga, or sip craft cocktails at Topside Terrace with epic skyline scenes. With on-site dining, upgraded Wi-Fi, pet-friendly rooms, and a modern coastal-chic vibe, it’s your perfect launchpad for adventure and connection.

The Sofia Hotel
4.87 out of 5 average rating, 62 reviews

The Sofia Hotel

Unwind in a non-smoking room with a plush king bed, air conditioning, and modern amenities like a workspace, microwave, refrigerator, and cable TV. Special suites offer extra touches, including fine linens, ambient lighting, and elegant decor. Every detail blends Sofia signature charm with comfort and style, ensuring a memorable stay.

Hotel room in San Diego
4.73 out of 5 average rating, 125 reviews

Perched right on the sand in Pacific Beach

At the Wayfarer San Diego, we offer 118 guest rooms and 8 suites, many with picture-perfect ocean views. Unwind in style in a San Diego Pacific Beach accommodation featuring surf-chic décor, a mini refrigerator, 65-inch flat-screen TV, complimentary Wi-Fi, and a furnished balcony to take in each beachside sunrise and sunset.

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