
Boutique hotel holiday rentals in Tokyo
Find and book unique boutique hotel rentals on Airbnb
Top-Rated Boutique Hotels in Tokyo
Guests agree: These boutique hotel rentals are highly rated for location, cleanliness and more.

90sqm. Tatami, traditional Japanese style room
Our room is featured real Japanese style. Many Japanese also love this simple and traditional space. It'll be chance to know real Japan! 3 subway 5 mins walk. Tukiji 5 mins by subway, Ginza, Akiba, Asakusa, 15mins by subway without transfer. Here is popular for large family trip. We have 3 separate room with bed and FUTON. Especially family with kids can choose many baby equipment. From NARITA Airport 55 min, HANEDA 25min. We can store your luggage before check-in or after check-out for free!

The Hideout Tokyo -(Double Room)-
We're Central Tokyo's family run hotel for those who want to travel in style. Our petite 5-room hotel offers reasonably priced compact yet cozy accommodation with many of the features you'd expect from a larger,branded property. Private shower&sink. We're located walking distance from many of Tokyo's finest sightseeing spots and just a 4/2 minute walk from JR Yamanote line,Subway Hibiya line connecting you quickly to the rest of the city. ※We’re legal hotel with hotel permit from the government

Standard Room|Accessible|20mShinjuku|Kagurazaka
Barrier-free room ideal for families or small groups. The ground-floor 30 m² twin sleeps up to 4 with two Simmons double beds. In-room: free Wi-Fi, A/C, mini-fridge, air-purifier, safe, TV and hair-dryer. Bathroom stocked with shampoo, conditioner, body & hand soap, towels, gowns, slippers, toothbrush set, cotton kit, razor, sponge and brush. No on-site parking or washer—please use nearby coin lots and laundromats. Fee-based rentals (limited): hair iron, board games, projector, Fire TV Stick.

④ Newly built in 2020/Queen bed/Modern bathroom/Rain shower Sunshine City 3 minutes
Newly built with travelers in mind. The rooms are spacious with Queen size beds (practically unheard-of in Japan). Smart TV, Wi-Fi, tea and coffee. The bathrooms are fashionable, with large walk in rain showers. LED mirrors to get you ready for whatever lighting you will encounter. Rooms have a bar fridge, microwave and kettle for you to store and prepare ready-made meals and drinks. All rooms come equipped with Air-conditioning, ceiling fans and black-out curtains. Ample storage space also!

全新開幕!2房1廳+吧台廚房!4-5人家庭房!浅草寺景觀!直通羽田&成田機場!
the Moto Hotel Asakusa is a new hotel opened in June 2021. The nearest station is Ginza sen-Asakusa station 7-8mins by walking. JR Ueno station is walking by 30 mins or 3 steps by Ginza Line(from Asakusa station to Ueno station)is 6 mins. Askusa is famous for the Sensō-ji and it's only 1min from us. The development of Asakusa as an entertainment district during the Edo period so there's many delicious & traditional food & store surround us. The Kappabashi Dougu street is 7mins by foot too.

Nippori train 2min 6Bed 3WC 2Bath Ueno Akihabara
「MoRi House IN 西日暮里」は 2019年新築の三階建一棟ビル3LDK97㎡ 寝室3室・トイレ3室・シャワー1室・バスタブ1室・キッチン1室 # 3寝室 -寝室A( 1階、シングルベッド2床個室) -寝室B ( 3階、ダブルベッド2床備えた個室) -寝室C (3階、ダブルベット2床備えた個室) 家族、親友同士で自宅感覚で寛げる快適空間を提供致します。 普通のホテルと違い、システム対面キッチンが備え付けており、就寝は一階と三階別々の部屋で、皆んなの集まりは二階のリビングで、キッチン設備を使ってお好きの料理も作って楽しめる事が可能です。 旅先でも自宅にいるような「家族団欒」気分を楽しむ事が出来ます。 当施設までのアクセスはとても便利です。 成田空港から新三河島駅までは京成線一本で着きます。 新三河島駅からは歩いて3分の距離に位置しています。 その他最寄り駅までの徒歩所要時間 JP「西日暮里駅」10分、東京メトロ千代田「西日暮里駅」8分 バス停留所も近くにあります。 届出・登録番号 旅館業法の許可番号 | 東京都保健所 | 30荒保環き(三)第25号

【Ginza/Tokyo】 Junior Suite /Hotel Vintage Tsukiji
A quiet, full-floor suite near Tsukiji and Ginza. Hotel Vintage Tsukiji offers a modern Japanese-style space with warm lighting and wood textures—more like a private home than a hotel. Walk to morning sushi at Tsukiji, hidden cafés in Ginza, or canals in Kachidoki. Ideal for families with teens or university students. Includes Wi-Fi, microwave, and a deep bath. Enjoy privacy, comfort, and a stay that feels local. This is more than just a place to sleep—it’s your Tokyo hideaway.

12-min walk to Sensoji - Boutique Hotel
一遊ホテル浅草 is a boutique hotel located in Taito City, offering excellent access to major transportation. Nestled in a quiet residential neighborhood, yet close to Tokyo’s most popular sightseeing spots, this is an ideal base for tourists, couples, and business travelers – only a 12-minute walk from the famous Sensoji Temple, where you can enjoy the blend of traditional culture and modern Tokyo vibes. Plenty of dining options nearby, from traditional Japanese food to stylish cafes.

4 single beds in Tokyo/2 train stations : Studio A
A quiet, modern & unique structured room with 4single beds & a private bathroom. 2train stations in 10min. walk, easy access to Shinjuku, Shibuya, Akihabara, Asakusa, Tokyo Dome and Disney Resort! Not 24H open reception, MUST arrive by 11PM. After 11PM check in is not available. *No early check in (from 3PM) *No late check in (by 11PM) *No late check out (by 10AM). *No discount. *Max : 4people. *For the environment room cleaning will be done once in 5nights.

New Hotel■3 mins to Higashi-Matsudo St-PAX 3■HM-D
3 mins walk from Higashi-Matsudo Station. Only 38mins from Narita Airport and 65mins from Haneda Airport by train. It is a self-check-in hotel, located in a quiet area, very suitable for relaxing and sleeping. We have an elevator, room Wifi, the dining table also can be used for the office table. In addition to rich design and decoration, we also provide high-quality facilities that are only available in high-end hotels. Can't wait to welcome you.

Stay in Art 1 min from Koenji Sta./BnA Koenji 2F
BnA Home Koenji is an independent art hotel created by the Bed & Art Project (BnA)—an ambitious and experimental hospitality concept that blends art, community, and immersive travel. At BnA, guests don't just stay at a hotel—they stay inside a work of art. Each room is a one-of-a-kind collaboration, designed and built by local artists, architects, textile designers, and carpenters to create a deeply personal and unforgettable experience.

TheMillennialsShibuya/Mixed Smart Pod/1 Guest
Welcome to The Millennials Shibuya, a futuristic accommodation facility equipped with the world's first IOT-equipped "Smart Pod" and a lounge with a coworking space. In addition, there are plenty of common spaces, including a 24-hour shared lounge, a 24-hour self-kitchen, a 24-hour working lounge, a shared shower and toilet, and a shared laundry. 20% of the total area of the hotel is allocated to the common area.
Popular amenities for Tokyo Boutique Hotels
Family-Friendly Boutique Hotels

Shinjuku 10mins! Relaxing room max 4ppl!

5 min walk to Skytree Station, direct access to airport and Disney, kitchen, washing machine, wifi, elevator, Amin Hotel

4F Shin-Okachimachi: A charming city where you can enjoy both the city center and downtown. Asakusa Ueno: The starting point of the Asakusa downtown area. Former Asakusa

Newly opened hotel-style t suite Subway 3 minutes

New hotel/Compact Twin/2 people

HOTEL Japonica

Newly opened hotel-style t suite Subway 3 minutes

Newly opened hotel-style t suite Subway 3 minutes
Boutique Hotels with a patio

Asakusa Direct 2 Bathrooms Skytree Station 5 Minutes Walk 2 Suites Airport Direct Kitchen Washing Machine Amin Hotel

4 bedrooms, 4 bathrooms, 4 washing machines, 4 kitchens, direct access to the airport, washing machine, elevator building, 5 minutes walk to Skytree station

3 sets of bathrooms MAX14 people Skytree station 5 minutes 3 suite airport direct access to kitchen washing machine elevator

5 min walk to Skytree Station, direct access to airport and Disney, kitchen, washing machine, wifi, elevator, Amin Hotel

Shibuya Direct 5 to Skytree Subway Hike 2 Suites 2 Bathroom Airport Direct Access to Kitchen Washing Machine Elevator

Direct access to the airport, 5 minutes walk to Skytree Station, 2 suites, 2 bathrooms, kitchen, washing machine, elevator, Amin Hotel

TheMillennialsShibuya/Smart Pod Girls Only/1 Guest

4 bedrooms, 4 bathrooms, 3 washing machines, 4 kitchens, direct access to the airport, elevator building, 5 minutes walk to Skytree station
Other boutique hotel holiday rentals

PEGASUS HOTEL (Japanese room) 502

2nd Floor Artistic Twin Room Inspired by Noh Dream

Cozy Loft Room with Noh Art Vibes – Near JR Otsuka

4 single beds in Tokyo/2 train stations: Studio B

全新開幕!2房1廳+吧台廚房!4-5人家庭房!浅草寺景觀!陽台晴空塔夜景!直通羽田&成田機場!

Modern queen suite with private bathroom - rooftop

About 5 minutes on foot from Azabu Juban Station/double room "Breakfast included"

Room 101, 3 mins walk from Asakusabashi Station, Asakusa, Akihabara, Ueno neighborhood, kitchen with cooking utensils, washing machine, direct access to Haneda and Narita Airport
Quick stats about boutique hotel rentals in Tokyo
Total rentals
240 properties
Nightly prices starting at
$46 AUD before taxes and fees
Total number of reviews
20K reviews
Family-friendly rentals
20 properties are a good fit for families
Rentals with dedicated workspaces
110 properties have a dedicated workspace
Wi-Fi availability
240 properties include access to Wi-Fi
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- Boutique hotel rentals Tokyo Prefecture
- Boutique hotel rentals Japan
- Asakusa Sta.
- Oshiage Sta.
- Senso-ji Temple
- Tokyo Skytree
- Akihabara Sta.
- Shibuya Station
- Tokyo Sta.
- Kinshicho Sta.
- Tokyo Disney Resort
- Ikebukuro Station
- Tokyo Disneyland
- Nippori Sta.
- Ueno Sta.
- Shimo-Kitazawa Sta.
- Tokyo Tower
- Haneda Airport Terminal 1 Sta.
- Yoyogi Park
- Koenji Station
- Kamakura Yuigahama Beach
- Tokyo Dome
- Otsuka Station
- Shinagawa Station
- Kamata Sta.
- Makuhari Station
- Things to do Tokyo
- Art and culture Tokyo
- Nature and outdoors Tokyo
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- Food and drink Tokyo
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- Tours Tokyo Prefecture
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- Things to do Japan
- Wellness Japan
- Food and drink Japan
- Sightseeing Japan
- Tours Japan
- Art and culture Japan
- Entertainment Japan
- Nature and outdoors Japan
- Sports activities Japan