
Hotels in San Juan Islands
Find and book unique hotels on Airbnb
Top-rated hotels in San Juan Islands
Guests agree: these hotels are highly rated for location, cleanliness and more.

Dungeness Valley Inn -Olympic Discovery Trail Rm
Dungeness Valley Inn a four room Inn/Motel, with unique themes; Lavender, Olympic Discovery Trail, Lighthouse, and Lake Crescent Rooms found as separate listings on Airbnb. Close to the mountains, ¼ mile to Discovery Trail & next to the OLD MILL CAFE, and just 5 mile to Sequim and a short bicycle ride to the beach & Port Angeles. Hiking, biking, or golfing are here. Old Mill Café is next door with outstanding meal and drinks. The on the front of the INN is a Large MAP to access the entire NOP.
ValueLocationBackyard

King Spa Bunk Room
This King room has views of our beautiful property & some views of the bay! King bed and euro-lounger that makes into a double. Separate area with bunk beds (2 single beds). Access to our private beach! Two person whirlpool tub under a skylight; fine Microfiber bathrobes, Electric, river rock fireplace, desk. No kitchen but a small refrigerator, microwave, coffee maker – coffee and tea are provided. Other amenities include hairdryer, fine microfiber bathrobes, cable TV, VHS,DVD.
LocationFamilyBathroom

Studio apartment, Orcas Island, Madrona Suites #2
Enjoy a stylish experience Brand new suites situated in the heart of Eastsound on Orcas Island. Enjoy the best of both worlds, with central walking access to shops, dining and nature. This Studio Suite is the ideal accommodations for two guests, destination diners, couples. Fresh, clean, convenient, modern, luxury fixtures, comfortable, and suited to your needs. Built and operated by longtime islanders, and the preferred accommodations of Matia Kitchen, you're in good hands!
LocationDecorHospitality

Steps to Alderwood Mall + Free Breakfast & Kitchen
Stay minutes from Alderwood Mall, Boeing Everett, and downtown Seattle in this spacious all-suite property designed for comfort and convenience. Enjoy a free hot breakfast each morning, take a dip in the seasonal outdoor pool, or hit the fitness center for a quick workout. Every suite includes a full kitchen and free Wi-Fi—perfect for families, business travelers, or weekend explorers. Pet-friendly and close to I-5, it’s your easy gateway to the best of the Pacific Northwest.
ValueLocationNearby

Near Paine Field Airport | Pool + Free Breakfast
Located in Lynnwood, just north of Seattle, this all-suite property offers easy access to Alderwood Mall, Downtown Seattle, Paine Field, and major Pacific Northwest attractions. Guests enjoy spacious suites with full kitchens, complimentary hot breakfast, free Wi-Fi, an indoor pool, fitness center, and a weekly evening social. Whether you're visiting for business, shopping, or sightseeing, this convenient location makes exploring the Seattle area simple and enjoyable.

Waterfront Suite with Full Kitchen & Scenic Views
Enjoy comfort and flexibility at Rosario Village in the Harborside Hearth Suite, with a king bed and double Murphy bed. Featuring a full kitchen and peaceful water views, it’s the perfect cozy retreat by the water. ✔ Just 5 minutes from Moran State Park 🌲 ✔ Full kitchen for cooking and dining 🍳 ✔ Private balcony or patio with seating 🪴 ✔ Roku-enabled Smart TV 📺 ✔ Contactless Smart Lock for easy check-in 🔑 ✔ Complimentary parking 🚗 with EV charging available ⚡
LocationValueHospitality

Near Woodinville Wine Country + Breakfast & Pool
Stay near UW Bothell and Woodinville Wine Country in this modern all-suite stay designed for comfort and convenience. Enjoy a free hot breakfast each morning, take a dip in the seasonal outdoor pool, or grill out in the courtyard patio. Each suite features a full kitchen and free Wi-Fi—perfect for work trips, family visits, or wine weekends. With pet-friendly rooms and easy access to I-405, you’ll have the best of the Pacific Northwest right at your doorstep.
ValueLocationIndoor spaces

Channel View Historic Suite (Queen) - #5
Nestled in the heart of La Conner, we boast a prime location, providing easy access to the town's renowned restaurants and eclectic gift shops. The allure of our establishment is enhanced by a beautiful courtyard, a serene oasis centrally located on our property, offering a tranquil escape for our guests. Experience a bygone era while visiting our boutique 12-room hotel. Your journey into the heart of La Conner begins here, at Hotel Planter!
LocationAir conditioningCleanliness

Lake Campbell Lodging unit 1
Lake Campbell Lodging: Unit 1 offers a charming and convenient base for your Fidalgo Island adventures. This quaint, family-owned motel is perfectly situated on Highway 20, directly across from the scenic Lake Campbell and centered between the dramatic views of Deception Pass and the historic charm of downtown Anacortes. This unit has a full kitchen and plenty of room to stretch out.
Hospitality

Queen Suite w Two Queen Beds w Kitchen
Hi, Welcome to Angeles motel, We are not pet friendly and No smoking motel, We have Free WIFI, cable TV, guests laundry room and parking, Very close to National Park and ferry and 6 blocks away to downtown. We do not welcome the guests with bad reviews, We do not welcome the guests with no reviews, the Guests with bad reviews or with no reviews please try somewhere else, Thanks!
FamilyLocationView

Chic Boutique Hotel Room B
Enjoy a beautiful getaway when you choose The Vic. The Garden City is yours to explore when you visit our boutique hotel in Victoria, BC. With a central location in the heart of a scenic, historic community, we offer easy access to Victoria’s Inner Harbour, Victoria International Airport (YYJ), and Mayfair Shopping Centre, featuring over 120 upscale shops.
ValueLocationCleanliness

College Inn Hotel
Premium double queen offers a private retreat with two queen beds, desk, sitting benches, and a private bath. Enjoy wifi, cable TV, ceiling fan, hairdryer, and access to a shared kitchen and loft. Complimentary tea and coffee are provided. Cribs available upon request.
ValueLocationCheckout
Popular amenities for San Juan Islands hotels
Family-friendly hotels

King Room-Non Smoking
LocationValueIndoor spaces

Near Lake Washington + Fitness & Pet-friendly Stay
ValueLocationNearby

MarQueen Hotel
ValueLocationCheck-in

Camano Island Inn Room 2
LocationValueComfort

Comfy Unit in Red Lion Inn & Suites Sequim, Pool
ValuePetsHospitality

Near Microsoft Campus + Free Breakfast. Pool. Gym.
ValueLocationSleep quality

Family Double Queen Room
LocationCheckoutHospitality

Silver Cloud Hotel - Seattle Lake Union
LocationHospitalityParking
Hotels with a pool

Pet-Friendly Stay | Free Breakfast + Full Kitchen

Staypineapple at University Inn
LocationValueQuiet

Chic Boutique Hotel Room A
ValueFamilyHiking

Staypineapple at University Inn
LocationValueGetting around

Affordable Getaway! Free Breakfast, Free Parking
LocationCheck-inHot tub

Junior Suite | Semiahmoo Resort | Pet-friendly

Walk to Alderwood Mall + Breakfast. Kitchen. Pool.
LocationAccuracyGetting around

Family-Centric Units Near Olympic State Park!
FamilyLocationIndoor spaces
Hotels with a patio

Kingfish Inn Spruce King Suite w/ Private Deck

WorldMark Birch Bay - Studio
Sleep qualityBathroomCondition

Deluxe King Suite with Panoramic Ocean View
LocationQuietComfort

Bayside King Room with Stunning Island Views
LocationValueBeach

Hillside 2BR Suite with Fireplace & Balcony
FamilyLocationNearby

Waterfalls Hotel - Stunning 2 Bedroom Luxury Condo

Harborside King Room with Serene Water Views
LocationWi-FiGetting around

Bayside Queen Room with Stunning Island Views
LocationValueAccuracy
Destinations to explore
- Apartment rentals San Juan Islands
- Family-friendly rentals San Juan Islands
- Rentals with pools San Juan Islands
- Rentals with lake access San Juan Islands
- Cottage rentals San Juan Islands
- Guesthouse rentals San Juan Islands
- Waterfront rentals San Juan Islands
- Farmstay rentals San Juan Islands
- Rentals with beach access San Juan Islands
- Rentals with an EV charger San Juan Islands
- Rentals with a fireplace San Juan Islands
- Loft rentals San Juan Islands
- Bed and breakfasts San Juan Islands
- Pet-friendly rentals San Juan Islands
- Rentals with a hot tub San Juan Islands
- RV rentals San Juan Islands
- Serviced apartment rentals San Juan Islands
- Rentals with a kayak San Juan Islands
- Boutique hotels San Juan Islands
- Fitness-friendly rentals San Juan Islands
- Condo rentals San Juan Islands
- Smoking-friendly rentals San Juan Islands
- Townhouse rentals San Juan Islands
- Villa rentals San Juan Islands
- Rentals with breakfast San Juan Islands
- Rentals with a patio San Juan Islands
- Bungalow rentals San Juan Islands
- Rentals with a washing machine and dryer San Juan Islands
- Rentals with outdoor seating San Juan Islands
- Rentals with a sauna San Juan Islands
- House rentals San Juan Islands
- Private suite rentals San Juan Islands
- Beachfront rentals San Juan Islands
- Rentals with a fire pit San Juan Islands
- Beach house rentals San Juan Islands
- Cabin rentals San Juan Islands
- Hotel rooms San Juan County
- Hotel rooms Washington
- Hotel rooms United States
- Queen Elizabeth Park
- Bear Mountain Golf Club
- Holland Park
- University Of Victoria
- Birch Bay State Park
- Salt Creek Recreation Area
- French Beach
- Metropolis at Metrotown
- Moran State Park
- White Rock Pier
- Simon Fraser University
- Deception Pass State Park
- Olympic Game Farm
- VanDusen Botanical Garden
- Kinsol Trestle
- Willows Beach
- Port Angeles Harbor
- Craigdarroch Castle
- Richmond Centre
- Malahat SkyWalk
- Lougheed Town Centre
- Central Park
- Whatcom Falls Park
- Olympic View Golf Club




